propagateGO {mdgsa} | R Documentation |
Genes annotated under a GO term inherit the annotation from all its ancestors.
propagateGO(annot, verbose = FALSE)
annot |
annotation list or matrix. |
verbose |
verbose |
Uses the library GO.db.
A annotation matrix or list with the propagated annotation.
David Montaner dmontaner@cipf.es
mat <- cbind (c("gene1", "gene2"), c("GO:0034390", "GO:0042889")) mat propagateGO (mat) li <- list ('GO:0034390' = "gene1", 'GO:0042889' = "gene2") li propagateGO (li)