snp2gene {martini} | R Documentation |
Maps SNPs from a GWAS experiment to genes.
snp2gene(gwas, organism = 9606, flank = 0)
gwas |
A SnpMatrix object with the GWAS information. |
organism |
Organism: hsapiens represents human, athaliana for Arabidopsis thaliana, etc. |
flank |
A number with the flanking regions around genes to be considered part of the gene i.e. SNPs mapped to them will be considered mapped to the gene. |
A data.frame with two columns: one for the SNP and another for the gene it has been mapped to.