isoTop {isomiRs}R Documentation

Heatmap of the top expressed isomiRs

Description

This function creates a heatmap with the top N isomiRs/miRNAs. It uses the matrix under counts(ids) to get the top expressed isomiRs/miRNAs using the average expression value and plot a heatmap with the raw counts for each sample.

Usage

isoTop(ids, top = 20)

Arguments

ids

Object of class IsomirDataSeq.

top

Number of isomiRs/miRNAs used.

Value

PCA of the top expressed miRNAs

Examples

data(mirData)
isoTop(mirData)

[Package isomiRs version 1.18.1 Index]