scale_x_logicle {ggcyto}R Documentation

Add a logicle scale to the x or y axes of a ggcyto plot.

Description

Add a logicle scale to the x or y axes of a ggcyto plot.

Usage

scale_x_logicle(..., w = 0.5, t = 262144, m = 4.5, a = 0)

scale_y_logicle(..., w = 0.5, t = 262144, m = 4.5, a = 0)

Arguments

...

common continuous scale parameters passed to 'continuous_scale' (not used currently)

w, t, m, a

see 'help(logicleTransform')

Value

ScaleContinuous object

Examples

data(GvHD)
fr <- GvHD[[1]]
p <- ggcyto(fr, aes(x = `FL1-H`)) + geom_density()
#display at raw scale
p 
#display at transformed scale
p + scale_x_logicle(t = 1e4)

[Package ggcyto version 1.18.0 Index]