npci.index.to.be.removed {fCI} | R Documentation |
This function will be depreciated.
npci.index.to.be.removed(expr.by.fold, d, symmetric.fold, max.rank, l.max.rank, r.max.rank)
expr.by.fold |
a 1xN matrix of fold change between case and control for every genes in N genes |
d |
the dimension of the data, if RNA-Seq or LC-MS/MS data, d=1 |
symmetric.fold |
a booleam valuable indicating whether to use the same fold change cutoff for upregulation and downregulation |
max.rank |
the maximum fold change, i.e 3 fold |
l.max.rank |
the maximum fold change for downregulation, i.e 1.5 fold |
r.max.rank |
the maximum fold change for upregulation, i.e 1.5 fold |
TBD
indexes |
gene (indexes) considered as differentially expressed |
TBD
Shaojun Tang
http://software.steenlab.org/fCI/
TBD
print("Function to be discarded!")