parseCMapID {cTRAP} | R Documentation |
Parse CMap identifier
parseCMapID(id, cellLine = FALSE)
id |
Character: CMap identifier |
cellLine |
Boolean: if |
Character vector with information from CMap identifiers
Other functions related with the ranking of CMap perturbations:
as.table.referenceComparison()
,
filterCMapMetadata()
,
getCMapConditions()
,
getCMapPerturbationTypes()
,
loadCMapData()
,
loadCMapZscores()
,
plot.perturbationChanges()
,
plot.referenceComparison()
,
plotTargetingDrugsVSsimilarPerturbations()
,
prepareCMapPerturbations()
,
print.similarPerturbations()
,
rankSimilarPerturbations()
id <- c("CVD001_HEPG2_24H:BRD-K94818765-001-01-0:4.8", "CVD001_HEPG2_24H:BRD-K96188950-001-04-5:4.3967", "CVD001_HUH7_24H:BRD-A14014306-001-01-1:4.1") parseCMapID(id, cellLine=TRUE) parseCMapID(id, cellLine=FALSE)