quickSummary {beadarray} | R Documentation |
A utility function for quickly creating summary values for particular IDs (e.g. control IDs) on a given section.
quickSummary(BLData, array = 1, transFun = logGreenChannelTransform, reporterIDs = NULL, reporterTags = NULL, reporterFun = function(x) mean(x, na.rm = TRUE))
BLData |
a |
array |
Which section to summarize |
transFun |
a transformation to be applied prior to summarization |
reporterIDs |
vector specifying the set of IDs to be summarized |
reporterTags |
a vector that divides the supplied IDs into categories |
reporterFun |
a function used to summarize each category |
The function can be used to calculate summarized values for particular control types on a section. The IDs for all controls are supplied in the reporterIDs
argument along with which control type they belong to in the reporterTags
argument. A summarized value for each control type is then calculated with the specified function (default is mean).
Mark Dunning
if(require(beadarrayExampleData)){ data(exampleBLData) quickSummary(exampleBLData, array=1) quickSummary(exampleBLData, array=2) }