peakIntegrate {adductomicsR}R Documentation

integrate a peak from a peak table with peak start and peak end retention times

Description

integrate a peak from a peak table with peak start and peak end retention times

Usage

peakIntegrate(peakTable = NULL, peakStart = NULL, 
peakEnd = NULL, expMass = NULL, 
expRt = NULL)

Arguments

peakTable

a table of at least 5 columns:

  1. mass-to-charge.

  2. intensity

  3. adjusted retention time

  4. raw retention time

  5. scan numbers

peakStart

retention time for peak start (in seconds).

peakEnd

retention time for peak end (in seconds).

expMass

expected mass-to-charge of target.

expRt

expected retention time of target (in seconds).

Value

list with peak and peak table


[Package adductomicsR version 1.6.0 Index]