extract.MAF.HuGO.Entrez.map {TRONCO}R Documentation

extract.MAF.HuGO.Entrez.map

Description

Extract a map Hugo_Symbol -> Entrez_Gene_Id from a MAF input file. If some genes map to ID 0 a warning is raised.

Usage

extract.MAF.HuGO.Entrez.map(file, sep = "\t")

Arguments

file

MAF filename

sep

MAF separator, default \'\t\'

Value

A mapHugo_Symbol -> Entrez_Gene_Id.


[Package TRONCO version 2.22.0 Index]