getLinkedOmicsData {TCGAbiolinks} | R Documentation |
Retrieve linkedOmics data from http://linkedomics.org/
getLinkedOmicsData(project, dataset)
project |
A linkedOmics project:
|
dataset |
A dataset from the list below
|
A matrix with the data
## Not run: TCGA_COAD_protein <- getLinkedOmicsData( project = "TCGA-COADREAD", dataset = "Proteome (Gene level)" ) TCGA_COAD_RNASeq_hiseq <- getLinkedOmicsData( project = "TCGA-COADREAD", dataset = "RNAseq (HiSeq, Gene level)" ) TCGA_COAD_RNASeq_ga <- getLinkedOmicsData( project = "TCGA-COADREAD", dataset = "RNAseq (GA, Gene level)" ) TCGA_COAD_RPPA <- getLinkedOmicsData( project = "TCGA-COADREAD", dataset = "RPPA (Gene level)" ) ## End(Not run)