writeUniqueProfileSpecificResult {SpeCond} | R Documentation |
Produces a text file with the unique specific profiles among the conditions detected by the SpeCond analysis.
writeUniqueProfileSpecificResult(L.specific.result, file.name.unique.profile = "specific.unique_profile.txt", full.list.gene = FALSE)
L.specific.result |
the |
file.name.unique.profile |
the name of the produced file containing the gene's profiles |
full.list.gene |
If TRUE, the last column correspond to the gene's names which have the profile described in the row |
Florence Cavalli, florence@ebi.ac.uk
SpeCond
, getProfile
, writeSpeCondResult
, writeGeneResult
library(SpeCond) data(expressionSpeCondExample) ##Perform the condition specific detection analysis with SpeCond() generalResult=SpeCond(expressionSpeCondExample, param.detection=NULL, multitest.correction.method="BY", prefix.file="E", print.hist.pv=TRUE, fit1=NULL, fit2=NULL, specificOutlierStep1=NULL) specificResult=generalResult$specificResult ##write the result file writeUniqueProfileSpecificResult(L.specific.result=specificResult$L.specific.result, file.name.unique.profile="Example_specific_unique_profile.txt", full.list.gene=FALSE)