spatialCoords<-,SpatialExperiment-method {SpatialExperiment}R Documentation

spatialCoords-setter

Description

a setter method which sets/replaces the spatial coordinate in a SpatialExperiment class object.

Usage

## S4 replacement method for signature 'SpatialExperiment'
spatialCoords(x) <- value

Arguments

x

a SpatialExperiment class object

value

a DataFrame with the new spatial coordinates to set.

Value

none

Examples

example(SpatialExperiment)
fakeFishCoords <- cbind(fishCoordinates[,c(1:3)], fishCoordinates[,3])
        colnames(fakeFishCoords) <- c("MyCell_ID", "Irrelevant", "x", "y")
spatialCoords(se) <- fakeFishCoords
spatialCoords(se)

[Package SpatialExperiment version 1.0.0 Index]