get_clusters {STRINGdb} | R Documentation |
Returns a list of clusters of interacting proteins. See the iGraph (http://igraph.sourceforge.net/) documentation for additional information on the algorithms.
## S4 method for signature 'STRINGdb' get_clusters(string_ids, algorithm="fastgreedy")
string_ids |
a vector of STRING identifiers. |
algorithm |
algorithm to use for the clustering. You can choose between "fastgreedy", "walktrap", "spinglass" and "edge.betweenness"). |
list of clusters of interacting proteins.
Andrea Franceschini