renameRegions {SNPhood} | R Documentation |
renameRegions
renames regions from a SNPhood object.
renameRegions(SNPhood.o, newRegionsMapping, verbose = TRUE)
SNPhood.o |
Object of class |
newRegionsMapping |
Named list. For clarity of mapping, the names of the list must be the currently defined region names, and the values of each element the corresponding new ones. |
verbose |
Logical(1). Default TRUE. Should the verbose mode (i.e., diagnostic messages during execution of the script) be enabled? |
An object of class SNPhood
with the requested regions being renamed
renameBins
, renameDatasets
, renameReadGroups
data(SNPhood.o, package="SNPhood") mapping = as.list(paste0(annotationRegions(SNPhood.o),".newName")) names(mapping) = annotationRegions(SNPhood.o) SNPhood_mod.o = renameRegions(SNPhood.o, mapping)