selex.exampledata {SELEX} | R Documentation |
A function used to extract the sample files embedded in this package. The package contains 2 FASTQ files (R0.fastq.gz
and ExdHox.R2.fastq.gz
, and an XML configuration file (config.xml
).
selex.exampledata(outputFolder)
outputFolder |
Location on disk where the files should be extracted. |
Not applicable
#Initialize the SELEX package #options(java.parameters="-Xmx1500M") #library(SELEX) # Configure the current session workDir = file.path(".", "SELEX_workspace") selex.config(workingDir=workDir,verbose=FALSE, maxThreadNumber= 4) # Extract sample data from package, including XML database exampleFiles = selex.exampledata(workDir)