markers_for_heatmap {SC3}R Documentation

Reorder and subset gene markers for plotting on a heatmap

Description

Reorders the rows of the input data.frame based on the sc3_k_markers_clusts column and also keeps only the top 10 genes for each value of sc3_k_markers_clusts.

Usage

markers_for_heatmap(markers)

Arguments

markers

a data.frame object with the following colnames: sc3_k_markers_clusts, sc3_k_markers_auroc, sc3_k_markers_padj.


[Package SC3 version 1.18.0 Index]