rnb.execute.filter.summary {RnBeads} | R Documentation |
Calculates a table summarizing the effect of the applied filtering procedures.
rnb.execute.filter.summary(old.set, new.set)
old.set |
Methylation dataset before filtering as an object of type inheriting |
new.set |
Methylation dataset after filtering as an object of type inheriting |
This function expects that the sites and samples in new.set
are subsets of the sites and samples in
old.set
, respectively. If this is not the case, it exists with an error.
matrix
summarizing the number of removed and retained sites, samples, and (optionally) reliable and
unreliable measurements.
Yassen Assenov
rnb.run.preprocessing
for running the whole preprocessing module