.createFlags {Rhisat2}R Documentation

Create flags

Description

Given a named list of argument values, generate a single character string containing all arguments and values, separated by single spaces. Logical values imply that the argument is either included (without a value) or excluded in the character string. For vector-valued arguments, the values will be comma separated in the final string.

Usage

.createFlags(flagList)

Arguments

flagList

A named list of argument values. Vectors will be collapsed and separated by a comma.

Details

Adapted from the Rbowtie package

Value

A character string with the arguments and their values.


[Package Rhisat2 version 1.6.0 Index]