tni.preprocess {RTN}R Documentation

A preprocessing function for objects of class TNI.

Description

This is a generic function, provides all preprocessing methods for the 'tni.constructor' function.

Usage

tni.preprocess(object, rowAnnotation=NULL, colAnnotation=NULL, cvfilter=FALSE, 
    verbose=TRUE)

Arguments

object

this argument is an object of class TNI-class.

rowAnnotation

an optional data frame with gene annotation.

colAnnotation

an optional data frame with sample annotation.

cvfilter

a single logical value specifying to remove duplicated genes in the gene expression matrix using the gene annotation.

verbose

a single logical value specifying to display detailed messages (when verbose=TRUE) or not (when verbose=FALSE).

Value

A pre-processed TNI-class object.

Author(s)

Mauro Castro

See Also

tni.constructor

Examples


## see 'tni.constructor'!

[Package RTN version 2.14.1 Index]