getData {RTCGAToolbox} | R Documentation |
A go-to function for getting top level information from a
FirehoseData
object. Available datatypes for a
particular object can be seen by entering the object name in the
console ('show' method).
getData(object, type, platform)
object |
A |
type |
A data type to be extracted |
platform |
An index for data types that may come from multiple platforms (such as mRNAArray), for GISTIC data, one of the options: 'AllByGene' or 'ThresholdedByGene' |
Returns matrix or data.frame depending on data type
data(accmini) getData(accmini, "clinical") getData(accmini, "RNASeq2GeneNorm")