get.probe.matrix {RPA} | R Documentation |
Get probe matrix.
get.probe.matrix(cels, cdf = NULL, quantile.basis, bg.method = "rma", normalization.method = "quantiles", batch = NULL, verbose = TRUE)
cels |
List of CEL files to preprocess |
cdf |
Specify an alternative CDF environment |
quantile.basis |
Pre-calculated basis for quantile normalization in log2 domain |
bg.method |
Specify background correction method. See bgcorrect.methods() for options. |
normalization.method |
normalization method |
batch |
batch |
verbose |
Print progress information during computation |
Returns background-corrected, quantile normalized log2 probes x samples matrix
Leo Lahti leo.lahti@iki.fi
See citation("RPA")
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