reads_demo_01 {RJMCMCNucleosomes} | R Documentation |
GRanges
format
(for demo purpose).A group of forward and reverse reads, in a GRanges
, that can be
used to test the rjmcmc
function.
data(reads_demo_01)
A GRanges
containing forward and reverse reads.
A GRanges
containing forward and reverse reads.
rjmcmc
for profiling of nucleosome positions
## Loading dataset data(reads_demo_01) ## Nucleosome positioning rjmcmc(reads = reads_demo_01, nbrIterations = 100, lambda = 3, kMax = 30, minInterval = 146, maxInterval = 292, minReads = 5)