inertia {RCM}R Documentation

Calculate the log-likelihoods of all possible models

Description

Calculate the log-likelihoods of all possible models

Usage

inertia(rcm)

Arguments

rcm

an object of the RCM class

Value

A table with inertias, proportion inertia explained and cumulative proportion of inertia explained.

Examples

data(Zeller)
require(phyloseq)
tmpPhy = prune_taxa(taxa_names(Zeller)[1:100],
prune_samples(sample_names(Zeller)[1:50], Zeller))
zellerRCM = RCM(tmpPhy, round = TRUE)
inertia(zellerRCM)

[Package RCM version 1.6.0 Index]