NBjacobianAbunds {RCM}R Documentation

Jacobian for the column components of the independence model

Description

Jacobian for the column components of the independence model

Usage

NBjacobianAbunds(beta, X, reg, thetas, allowMissingness, naId)

Arguments

beta

a vector of length p with current abundance estimates

X

a n-by-p count matrix

reg

a vector of length n with library sizes estimates

thetas

a n-by-p matrix with overdispersion estimates in the rows

allowMissingness

A boolean, are missing values present

naId

The numeric index of the missing values in X

Value

a diagonal matrix of dimension p with evaluations of the jacobian function


[Package RCM version 1.6.0 Index]