Unknown-Genotype.fna {QSutils}R Documentation

Fasta file with reads of unknown genotype

Description

Fasta file with hepatitis B virus sequences of unknown genotype. This is used to illustrate the genotyping of HBV sequences with the QSutils package.

Format

Fasta file format. Each sequence starts with the symbol ">" followed by the sequence ID. Subsequent lines correspond to the nucleotide sequences or peptide sequences.

See Also

DBrule

Examples

filepath<-system.file("extdata","Unknown-Genotype.fna", package="QSutils")
lst2Geno <- ReadAmplSeqs(filepath,type="DNA")
hseq <- lst2Geno$hseq[1]
hseq

[Package QSutils version 1.8.0 Index]