ToyData_RVReads.fna {QSutils} | R Documentation |
Fasta file with reverse strand reads. Toy data used to illustrate the
intersections of forward and reverse haplotypes with the function
IntersectStrandHpls
.
Fasta file format. Each sequence starts with the symbol ">" followed by the sequence ID. Subsequent lines correspond to the nucleotide sequences or peptide sequences.
ToyData_FWReads.fna
, IntersectStrandHpls
filepath_FW<-system.file("extdata","ToyData_FWReads.fna", package="QSutils") lstFW <- ReadAmplSeqs(filepath_FW,type="DNA") filepath_RV<-system.file("extdata","ToyData_RVReads.fna", package="QSutils") lstRV <- ReadAmplSeqs(filepath_RV,type="DNA") lstI <- IntersectStrandHpls(lstFW$nr,lstFW$hseqs,lstRV$nr,lstRV$hseqs) lstI