parserOutputSummaryLR {PhenStat} | R Documentation |
Parsers model output summary and returns it in readable named vector format
parserOutputSummaryLR(linearRegressionOutput)
linearRegressionOutput |
linear regression output that comes from the MM methods; mandatory argument |
Returns a named vector with logistic regression model output summary results
Natalja Kurbatova, Natasha Karp, Jeremy Mason
Karp N, Melvin D, Sanger Mouse Genetics Project, Mott R (2012): Robust and Sensitive Analysis of Mouse Knockout Phenotypes. PLoS ONE 7(12): e52410. doi:10.1371/journal.pone.0052410
West B, Welch K, Galecki A (2007): Linear Mixed Models: A practical guide using statistical software New York: Chapman & Hall/CRC 353 p.
file <- system.file("extdata", "testLR.csv", package="PhenStat") testLR <- PhenStat:::PhenList(dataset=read.csv(file,na.strings = '-'), testGenotype="Mock") testLR2 <- PhenStat:::LRDataset(testLR,"V2") resultLR <- PhenStat:::testDataset(testLR2, depVariable="V2", method="LR") linearRegressionOutput <- PhenStat:::analysisResults(resultLR) PhenStat:::parserOutputSummaryLR(linearRegressionOutput)