phyloseq_to_edgeR {PathoStat} | R Documentation |
Further details.
phyloseq_to_edgeR(physeq, group, method = "RLE", ...)
physeq |
(Required). |
group |
(Required). A character vector or factor giving the experimental group/condition for each sample/library. |
method |
(Optional). |
... |
Additional arguments passed on to |
dispersion
data_dir_test <- system.file("data", package = "PathoStat") pstat_test <- loadPstat(indir=data_dir_test, infileName="pstat_data_2_L1.rda") phyloseq_to_edgeR(pstat_test, group="Sex")