plot,PWM,missing-method {PWMEnrich}R Documentation

Plotting for the PWM class

Description

This function produces a sequence logo (via package seqLogo).

Usage

## S4 method for signature 'PWM,missing'
plot(x, y, ...)

Arguments

x

the PWM object

y

unused

...

other parameters to pass to seqLogo's plot function

Examples

if(requireNamespace("PWMEnrich.Dmelanogaster.background")){
  data(MotifDb.Dmel, package = "PWMEnrich.Dmelanogaster.background")

  # plot the tinman motif from MotifDb
  plot(MotifDb.Dmel[["tin"]])
}

[Package PWMEnrich version 4.26.0 Index]