plotMultipleMotifs {PWMEnrich} | R Documentation |
Individual motif logos are plotted on a rows x cols grid. This function is a convenience
interface for the seqLogoGrid
function that deals with viewpoint placement in a
matrix-like grid layout.
plotMultipleMotifs( pwms, titles = names(pwms), rows = ceiling(sqrt(length(pwms))), cols = ceiling(sqrt(length(pwms))), xmargin.scale = 0.4, ymargin.scale = 0.4, ... )
pwms |
a list of PWM objects or frequency matrices |
titles |
a characater vector of titles for each of the plots |
rows |
number of rows in the grid |
cols |
number or cols in the grid |
xmargin.scale |
the scaling parameter for the X-axis margin. Useful when plotting more than one logo on a page |
ymargin.scale |
the scaling parameter for the Y-axis margin. Useful when plotting more than one logo on a page |
... |
other parameters passed to seqLogoGrid() |
By default will try to make a square grid plot that would fit all the motifs and use list names as captions.