permNULL {PANR} | R Documentation |
This is an internal S4 method for class PAN
to permute the original
inputted phenotyping screens to further fit the dissociation component of
the beta-mixture model.
permNULL(object, permMethod="keepRep", ...)
object |
an object of |
permMethod |
a character value of the method to permute, either 'keepRep' (keep the order of replicates) or 'all' (regardless of replicates). |
a matrix of permuted data.
Xin Wang xw264@cam.ac.uk
Xin Wang, Mauro Castro, Klaas W. Mulder and Florian Markowetz, Posterior association networks and enriched functional gene modules inferred from rich phenotypic perturbation screens, in preparation.
data(bm) bm.perm<-permNULL(bm1)