groupConfig {Onassis}R Documentation

groupConfig

Description

This method shows the value of the groupwise configuration used to compute semantic similarities between groups of concepts.

Sets the groupwise measure to compute the semantic similarity between groups of concepts. For available meausres use the method listSimilarities().

Usage

groupConfig(object)

groupConfig(object) <- value

## S4 method for signature 'Similarity'
groupConfig(object)

## S4 replacement method for signature 'Similarity'
groupConfig(object) <- value

Arguments

object

instance of class Similarity-class

value

See details

Details

The following measures are indirect groupwise measures, meaning that they are used to aggregate individual pairwise measures.

Direct groupwise measures directly compare the sets of concepts considering the features of both sets.

Value

groupwise configured measure for the similarity object provided as input

instance of the Similarity class with the new grouprwise option.

Examples

sim <- new('Similarity')
groupConfig(sim)
sim <- new('Similarity')
obo <- system.file('extdata', 'sample.cs.obo', package='OnassisJavaLibs')
ontology(sim) <- obo
groupConfig(sim) <- 'ui'


[Package Onassis version 1.12.0 Index]