interaction_graph {OmnipathR} | R Documentation |
transforms the interactions data.frame to an igraph object
interaction_graph(interactions = interactions)
An igraph object
import_omnipath_interactions
,
import_pathwayextra_interactions
,
import_kinaseextra_interactions
,
import_ligrecextra_interactions
,
import_dorothea_interactions
,
import_mirnatarget_interactions
or
import_all_interactions
interactions = import_omnipath_interactions(resources=c("SignaLink3")) OPI_g = interaction_graph(interactions)