print_path_es {OmnipathR}R Documentation

print network paths given by edge sequence

Description

Prints the interactions in the path in a nice format.

Usage

print_path_es(edgeSeq, G)

printPath_es(...)

Arguments

edgeSeq

edge sequence

G

igraph object (from ptms or any interaction dataset)

...

Passed to print_path_es.

Value

Interactions displayed in a nice format

See Also

print_path_vs

Examples

interactions = import_omnipath_interactions(resources=c("SignaLink3"))
OPI_g = interaction_graph(interactions = interactions )
print_path_es(shortest_paths(OPI_g,from = "TYRO3",to = "STAT3",
    output = 'epath')$epath[[1]],OPI_g)

[Package OmnipathR version 2.0.0 Index]