get_interaction_resources {OmnipathR} | R Documentation |
Gets the names of the resources from https://omnipath.org/interactions.
get_interaction_resources(dataset = NULL) get_interaction_databases(...)
dataset |
a dataset within the interactions query type. Currently available datasets are 'omnipath', 'kinaseextra', 'pathwayextra', 'ligrecextra', 'dorothea', 'tf_target', 'tf_mirna', 'mirnatarget' and 'lncrna_mrna' |
... |
Passed to |
character vector with the names of the interaction databases
get_resources,
import_all_interactions,
import_omnipath_interactions, import_pathwayextra_interactions,
import_kinaseextra_interactions,
import_ligrecextra_interactions,
import_mirnatarget_interactions,
import_dorothea_interactions
get_interaction_resources()