print_path_es {OmnipathR} | R Documentation |
Prints the interactions in the path in a nice format.
print_path_es(edgeSeq, G) printPath_es(...)
edgeSeq |
edge sequence |
G |
igraph object (from ptms or any interaction dataset) |
... |
Passed to |
Interactions displayed in a nice format
interactions = import_omnipath_interactions(resources=c("SignaLink3")) OPI_g = interaction_graph(interactions = interactions ) print_path_es(shortest_paths(OPI_g,from = "TYRO3",to = "STAT3", output = 'epath')$epath[[1]],OPI_g)