sampleClustering,RccSet-method {NanoStringQCPro} | R Documentation |
Clustering by sample correlation
## S4 method for signature 'RccSet' sampleClustering(rccSet, outputFile, main = "Sample correlations in raw data", annCol = NULL, covar = "SampleType")
rccSet |
An RccSet |
outputFile |
Output PNG filename |
main |
Plot title |
annCol |
See |
covar |
Covariate (e.g. "SampleType") |
A PNG file showing clustering of samples by correlation. Any zero-variance samples are omitted from the heatmap. The width and height of the PNG file are set to vary with the size of the input.
Dorothee Nickles, Robert Ziman