plot_mbs_contexts {MutationalPatterns} | R Documentation |
Plot the MBS contexts
plot_mbs_contexts(counts, same_y = TRUE)
counts |
A tibble containing the number of MBS per MBS length. |
same_y |
A boolean describing whether the same y axis should be used for all samples. |
Plots the number of MBS per MBS length per sample. It takes a tibble with counts as its input. This tibble can be generated by count_mbs_contexts Each sample is plotted in a separate facet. The same y axis can be used for all samples or a separate y axis can be used.
A ggplot figure.
Other MBS:
count_mbs_contexts()
,
plot_compare_mbs()
## Get The mbs counts ## See 'count_mbs_contexts()' for more info on how to do this. mbs_counts <- readRDS(system.file("states/blood_mbs_counts.rds", package = "MutationalPatterns" )) ## Plot contexts plot_mbs_contexts(mbs_counts) ## Use a different y axis for all samples. plot_mbs_contexts(mbs_counts, same_y = FALSE)