MSstatsTMTPTM {MSstatsTMTPTM}R Documentation

MSstatsTMTPTM: A package for detecting differencially abundant post translational modifications (PTM) in shotgun mass spectrometry-bsed proteomic experiments with tandem mass tag (TMT) labeling.

Description

A set of tools for detecting differentially abundant PTMs and proteins in shotgun mass spectrometry-based proteomic experiments with tandem mass tag (TMT) labeling. The functions in this package should be used after PTM/protein summarization. They can be used to both plot the summarized results and model the summarized datasets.

functions


[Package MSstatsTMTPTM version 1.0.2 Index]