pathwayDiggitIntersect {MOMA} | R Documentation |
Combine DIGGIT inferences with pathway knowledge
pathwayDiggitIntersect(diggit.int, pathway, pos.nes.only = TRUE, cores = 1)
diggit.int |
List of interactions between MRs - Genomic events, inferred by DIGGIT |
pathway |
- a list indexed by TF/MR entrez ID, contains the named vector of p-values for interactions |
pos.nes.only |
Only use positive associations between MR activity and presence of events (default = True) |
cores |
Number of cores to use if parallel is selected |
numeric vector, zscores for each TF/MR