validDiggitInteractions {MOMA}R Documentation

Return a set of events 'covered' by specified cMR-event interactions

Description

Return a set of events 'covered' by specified cMR-event interactions

Usage

validDiggitInteractions(interactions, gene.loc.mapping, selected.tfs)

Arguments

interactions

List indexed by amp/mut/del/fus from cMRs to interacting events

gene.loc.mapping

Data.frame mapping entrezIDs to cytoband locations

selected.tfs

For each event type list, search within only these cMRS

Value

a list of events 'covered' by the supplied interactions of type mut/amp/del/fus


[Package MOMA version 1.2.0 Index]