ModuleFrequency {MODA} | R Documentation |
Statistics of all conditions. To highlight conserved or condition-specific by counting how frequent each module is lablelled as which, and then visualize the frequency by bar plot.
ModuleFrequency(ResultFolder, intModules, conditionNames, legendNames, indicator)
ResultFolder |
where to store results |
intModules |
how many modules in the background network |
conditionNames |
a character vector, each of them is the name |
legendNames |
a character vector, each of them is the condition name showing up in the frequency barplot of condition. Or just single name |
indicator |
identifier of current profile, served as a tag in name |
None
Dong Li, dxl466@cs.bham.ac.uk
WeightedModulePartitionHierarchical
,
WeightedModulePartitionLouvain
,
WeightedModulePartitionSpectral
,
WeightedModulePartitionAmoutain
,
CompareAllNets