filterLowExpressedGenes {MAST}R Documentation

Filter low-expressing genes

Description

Filter out genes that have less than some percent threshold expression across all libraries

Usage

filterLowExpressedGenes(assay, threshold = 0.1)

Arguments

assay

a SingleCellAssay object

threshold

a numeric between 0, and 1, specifying the threshold frequency below which genes will be filtered out

Value

SingleCellAssay

Examples

data(vbetaFA)
filterLowExpressedGenes(vbetaFA)

[Package MAST version 1.16.0 Index]