plotCellDensity {LineagePulse} | R Documentation |
Uses kernel density estimate.
plotCellDensity(objLP)
objLP |
(LineagePulseObject) LineagePulseObject to base plot on. |
gplotKDE (ggplot object) ggplot2 kernel density estimator plot.
David Sebastian Fischer
lsSimulatedData <- simulateContinuousDataSet( scaNCells = 100, scaNConst = 10, scaNLin = 10, scaNImp = 10, scaMumax = 100, scaSDMuAmplitude = 3, vecNormConstExternal=NULL, vecDispExternal=rep(20, 30), vecGeneWiseDropoutRates = rep(0.1, 30)) objLP <- runLineagePulse( counts = lsSimulatedData$counts, dfAnnotation = lsSimulatedData$annot, strMuModel = "impulse") gplotCellDensity <- plotCellDensity(objLP = objLP) #print(gplotCellDensity)