IGHV_HCV {IgGeneUsage}R Documentation

IGHV gene usage in HCV+ and healthy individuals

Description

Publicly available dataset of IGHV segment usage in memory B-cells of 22 HCV+ individuals and 7 healthy donors.

Usage

data("IGHV_HCV")

Format

A data frame with 4 columns: "sample_id", "condition", "gene_name" and "gene_usage_count". The format of the data is suitible to be used as input in IgGeneUsage

Source

Tucci, Felicia A., et al. "Biased IGH VDJ gene repertoire and clonal expansions in B cells of chronically hepatitis C virus–infected individuals." Blood 131.5 (2018): 546-557.

Examples

data(IGHV_HCV)
head(IGHV_HCV)

[Package IgGeneUsage version 1.3.1 Index]