htx_load {HumanTranscriptomeCompendium} | R Documentation |
load a SummarizedExperiment shell for the Human Transcriptome Compendium
htx_load(remotePath = "https://s3.amazonaws.com/bcfound-bigrna/htxcompSE.rds", cache = BiocFileCache::BiocFileCache(), genesOnly = TRUE)
remotePath |
path to an RDS representation of the DelayedArray-based SummarizedExperiment |
cache |
a BiocFileCache instance, defaulting to value of BiocFileCache() |
genesOnly |
logical(1) if TRUE return reference to SummarizedExperiment with gene-level quantifications; in this case the remotePath value is set to 'https://s3.amazonaws.com/bcfound-bigrna/rangedHtxGeneSE.rds'. |
a RangedSummarizedExperiment instance
htx_load