makeGeneModel {GeneStructureTools} | R Documentation |
Convert GRanges gene model to data.frame for visualisation with Gviz
makeGeneModel(transcript)
transcript |
GRanges of gene model to be visualised |
data.frame of a gene model for visualisation
Beth Signal
Other Gviz gene structure visualisation: annotateGeneModel
gtf <- rtracklayer::import(system.file("extdata", "example_gtf.gtf", package="GeneStructureTools")) transcript <- gtf[gtf$type=="exon" & gtf$gene_name=="Neurl1a"] geneModel <- makeGeneModel(transcript)