breakpointsPerGene,CopyNumberBreakPointGenes-method {GeneBreak}R Documentation

Access Object breakpointsPerGene. This method returns a dataframe with breakpoints per gene.

Description

Access Object breakpointsPerGene. This method returns a dataframe with breakpoints per gene.

Usage

## S4 method for signature 'CopyNumberBreakPointGenes'
breakpointsPerGene(object)

Arguments

object

An object of class CopyNumberBreakPoints

Value

a dataframe with breakpoints per gene

Examples

data( copynumber.data.chr20 )
data( ens.gene.ann.hg18 )
bp <- getBreakpoints( copynumber.data.chr20 )
bp <- bpFilter( bp )
bp <- addGeneAnnotation( bp, ens.gene.ann.hg18 )
bp <- bpGenes( bp )

breakpointsPerGene( bp )

[Package GeneBreak version 1.20.0 Index]