plot_expression_profiles {GWENA} | R Documentation |
Plot expression profiles for all modules with eigengene highlighted
plot_expression_profiles(data_expr, modules, ...)
data_expr |
matrix or data.frame or SummarizedExperiment, expression data with genes as column and samples as row. |
modules |
vector, id (whole number or string) of modules associated to each gene. |
... |
additional parameters to pass to ggplot2::theme |
A ggplot representing expression profile and eigengene by module
df <- kuehne_expr[1:24, 1:350] net <- build_net(df, n_threads = 1) detection <- detect_modules(df, net$network, detailled_result = TRUE) plot_expression_profiles(df, detection$modules)