searchFeatureSets {GA4GHclient} | R Documentation |
Search for feature sets (genomic features, e.g. GFF files).
searchFeatureSets(host, datasetId, nrows = Inf, responseSize = NA_integer_)
host |
URL of GA4GH API data server. |
datasetId |
The Dataset to search. |
nrows |
Number of rows of the data frame returned by this function. If not defined, the function will return all entries. If the number of available entries is less than the value of this this parameter, the function will silently return only the available entries. |
responseSize |
Specifies the number of entries to be returned by the
server until reach the number of rows defined in |
This function requests POST host/featuresets/search
.
DataFrame
object.
host <- "http://1kgenomes.ga4gh.org/" ## Not run: datasetId <- searchDatasets(host, nrows = 1)$id searchFeatureSets(host, datasetId) ## End(Not run)