makeVCFHeaderFromGA4GHResponse {GA4GHclient} | R Documentation |
Convert DataFrame
output from
getVariantSet
function to VCFHeader
class.
makeVCFHeaderFromGA4GHResponse(variantSet)
variantSet |
|
VCFHeader
object.
getVariantSet
, VCFHeader
,
DataFrame
host <- "http://1kgenomes.ga4gh.org/" ## Not run: datasetId <- searchDatasets(host, nrows = 1)$id variantSetId <- searchVariantSets(host, datasetId, nrows = 1)$id variantId <- searchVariants(host, variantSetId, "1", 15031, 15031)$id variant <- getVariant(host, variantId) makeVCFFromGA4GHResponse(variant) ## End(Not run)