plotDifferences {FourCSeq} | R Documentation |
plotDifferences
generate plots to investigate the results
of getDifferences
plotDifferences( object, plotWindows = c(1e+05, 1e+06), textsize = 20, diffThresh = 0.01, controls = NULL, txdb = NULL, conditionAB = NULL )
object |
A |
plotWindows |
Window sizes around the viewpoint for which plots are generated. |
textsize |
Adjust text size. |
diffThresh |
Threshold on adjusted p-values calculated in the differential test. |
controls |
Auxiliary |
txdb |
Auxiliary |
conditionAB |
Condition A and B, for which the comparison is plotted. |
Felix A. Klein, felix.klein@embl.de
data(fcf, package="FourCSeq") fcf <- getDifferences(fcf, referenceCondition="WE_68h") plotDifferences(fcf)