GetClusters {FlowSOM} | R Documentation |
Get cluster label for all individual cells
GetClusters(fsom)
fsom |
FlowSOM object as generated by the FlowSOM function or the BuildSOM function |
vector label for every cell
fileName <- system.file("extdata", "68983.fcs", package="FlowSOM") flowSOM.res <- FlowSOM(fileName, compensate=TRUE,transform=TRUE, scale=TRUE,colsToUse=c(9,12,14:18),nClus=10) cluster_labels <- GetClusters(flowSOM.res) cluster_labels <- GetClusters(flowSOM.res$FlowSOM)