getPscores {FELLA}R Documentation

Get p-scores from the desired methodology

Description

Extractor function for the p-scores using the desired methodology

Usage

getPscores(object, method)

Arguments

object

FELLA.USER object

method

Character, exactly one of: "hypergeom", "diffusion", "pagerank"

Value

Named vector of p-scores

Examples

data(FELLA.sample)
data(input.sample)
obj <- enrich(
compounds = input.sample, 
data = FELLA.sample)
p <- getPscores(obj, "diffusion")
sum(p < 0.1)


[Package FELLA version 1.10.0 Index]