reducedDim<- {ExperimentSubset} | R Documentation |
A wrapper to the reducedDim<-
from
reducedDims method with additional support for
subsets.
reducedDim(object, type, subsetName) <- value
object |
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type |
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subsetName |
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value |
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Updated input object with reducedDim
set.
data(sce_chcl, package = "scds") es <- ExperimentSubset(sce_chcl) es <- createSubset(es, "subset1", rows = c(1:1500), cols = c(1:1500), parentAssay = "counts") reducedDim(es, type = "PCA", subsetName = "subset1") <- scater::calculatePCA( assay(es, "subset1"))