altExps {ExperimentSubset} | R Documentation |
A wrapper to the altExps method with additional support for subsets.
altExps(x, withColData = FALSE, subsetName) ## S4 method for signature 'ANY' altExps(x, withColData = FALSE, subsetName)
x |
|
withColData |
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subsetName |
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altExps
from the specified subset or same as
altExps when subsetName
is
missing
.
data(sce_chcl, package = "scds") es <- ExperimentSubset(sce_chcl) es <- createSubset(es, "subset1", rows = c(10,11,50,56,98,99,102,105,109, 200), cols = c(20,21,40,45,90,99,100,123,166,299), parentAssay = "counts") altExps(es, subsetName = "subset1") <- list( alt1 = SingleCellExperiment( assays = list( counts = assay(es, "subset1"))), alt2 = SingleCellExperiment( assays = list(counts = assay(es, "subset1")))) altExps(es, subsetName = "subset1")