altExp {ExperimentSubset} | R Documentation |
A wrapper to the altExp
from
altExps method with additional support for
subsets.
altExp(x, e, withColData = FALSE, subsetName) ## S4 method for signature 'ANY' altExp(x, e, withColData = FALSE, subsetName)
x |
|
e |
|
withColData |
|
subsetName |
|
The altExp
from the specified subset or same as altExp
from altExps when subsetName
is
missing
.
data(sce_chcl, package = "scds") es <- ExperimentSubset(sce_chcl) es <- createSubset(es, "subset1", rows = c(10,11,50,56,98,99,102,105,109, 200), cols = c(20,21,40,45,90,99,100,123,166,299), parentAssay = "counts") altExp(es, e = "altExample", subsetName = "subset1") <- SingleCellExperiment( assays = list(counts = assay(es, "subset1"))) altExp(es, subsetName = "subset1")