assay,ExperimentSubset,character-method {ExperimentSubset} | R Documentation |
Method to get an assay
from an ExperimentSubset
object or a subset from an ExperimentSubset
object or any object
supported by assay
from SummarizedExperiment
.
## S4 method for signature 'ExperimentSubset,character' assay(x, i, withDimnames = FALSE, ...)
x |
|
i |
|
withDimnames |
|
... |
Additional parameters. |
The assay
from the input object.
data(sce_chcl, package = "scds") es <- ExperimentSubset(sce_chcl) es <- createSubset(es, "subset1", rows = c(10,11,50,56,98,99,102,105,109, 200), cols = c(20,21,40,45,90,99,100,123,166,299), parentAssay = "counts") assay(es, "subset1", subsetAssayName = "subset1pAssay") <- assay(es, "subset1")[,] + 1 es