EventDetectionMultipath {EventPointer} | R Documentation |
Identification of all the multipath alternative splicing events in the splicing graphs
EventDetectionMultipath(Input, cores, Path, paths = 2)
Input |
Output of the PrepareBam_EP function |
cores |
Number of cores used for parallel processing |
Path |
Directory where to write the EventsFound_RNASeq.txt file |
paths |
Maximum number of paths of the events to find. |
list with all the events found for all the genes present in the experiment. It also generates a file called EventsFound_RNASeq.txt with the information each event.
# Run EventDetection function data(SG_RNASeq) TxtPath<-tempdir() AllEvents_RNASeq_MP<-EventDetectionMultipath(SG_RNASeq,cores=1,Path=TxtPath,paths=3)