mappedRTfromAlignObj {DIAlignR} | R Documentation |
Retention time from reference run is mapped to experiment run using AlignObj.
mappedRTfromAlignObj(refRT, tVec.ref, tVec.eXp, AlignObj)
refRT |
(numeric) retention time in reference run. |
tVec.ref |
(numeric) time vector of refernce run. |
tVec.eXp |
(numeric) time vector of experiment run. |
AlignObj |
(S4 object) must have indexA_aligned, indexB_aligned and score as slots. |
(numeric)
Shubham Gupta, shubh.gupta@mail.utoronto.ca
ORCID: 0000-0003-3500-8152
License: (c) Author (2019) + GPL-3 Date: 2019-12-13
data(XIC_QFNNTDIVLLEDFQK_3_DIAlignR, package="DIAlignR") tVec.ref <- XIC_QFNNTDIVLLEDFQK_3_DIAlignR[["run1"]][["14299_QFNNTDIVLLEDFQK/3"]][[1]][, "time"] tVec.eXp <- XIC_QFNNTDIVLLEDFQK_3_DIAlignR[["run2"]][["14299_QFNNTDIVLLEDFQK/3"]][[1]][, "time"] ## Not run: AlignObj <- testAlignObj() mappedRTfromAlignObj(refRT= 5238.35, tVec.ref, tVec.eXp, AlignObj) ## End(Not run)