mergeOswAnalytes_ChromHeader {DIAlignR}R Documentation

Merge dataframes from OSW and mzML files

Description

Merges dataframes on transition_id(OSW) = chromatogramId(mzML).

Usage

mergeOswAnalytes_ChromHeader(
  oswAnalytes,
  chromHead,
  analyteFDR = 1,
  runType = "DIA_proteomics"
)

Arguments

oswAnalytes

(dataframe) This is an output of getOswFiles.

chromHead

(dataframe) This has two columns: chromatogramId and chromatogramIndex with integer values.

analyteFDR

(numeric) Not used.

runType

(char) This must be one of the strings "DIA_proteomics", "DIA_Metabolomics".

Value

Invisible NULL

Author(s)

Shubham Gupta, shubh.gupta@mail.utoronto.ca

ORCID: 0000-0003-3500-8152

License: (c) Author (2019) + GPL-3 Date: 2019-12-13

See Also

getOswFiles


[Package DIAlignR version 1.2.0 Index]