saveGRangesAsTsv {DEScan2} | R Documentation |
save a GRanges object as tsv file.
saveGRangesAsTsv(GRanges, filepath = tempdir(), filename = tempfile(), force = FALSE, verbose = FALSE)
GRanges |
the GRanges object. |
filepath |
the path to store the files. |
filename |
the name to give to the files. |
force |
force overwriting. |
verbose |
verbose output flag. |
none
gr <- GRanges( seqnames=Rle(c("chr1", "chr2", "chr1", "chr3"), c(1, 3, 2, 4)), ranges=IRanges(1:10, end=10), strand=Rle(strand(c("-", "+", "*", "+", "-")), c(1, 2, 2, 3, 2)), seqlengths=c(chr1=11, chr2=12, chr3=13)) saveGRangesAsTsv(gr, verbose=TRUE)